npm

ideogram

Chromosome visualization for the web

• chromosome
• ideogram
• cytogenetics
• genomics
• visualization
• d3

eweitz

published 1.41.0 • 10 days agopublished 1.41.0 10 days ago

@gmod/ucsc-hub

Read and write UCSC track and assembly hub files in node or the browser

• trackDb
• genomics
• bionode
• biojs

cmdcolin

published 0.1.7 • a month agopublished 0.1.7 a month ago

oncoprintjs

A data visualization for cancer genomic data.

• cancer
• genomics
• visualization
• webgl

cbioportal

published 6.0.1 • 7 months agopublished 6.0.1 7 months ago

ibowankenobi-i-pv

Interactive Protein Sequence VIsualization/Viewer - Interactive Circos

• interactive
• protein
• javascript
• algorithm
• sequence
• visualization
• genetics
• proteomics
• genomics
• omics

ibowankenobi

published 0.1.23 • a year agopublished 0.1.23 a year ago

igv

Embeddable genomic visualization component based on the Integrative Genomics Viewer

• IGV
• genomics
• visualization

igvteam

published 2.13.11 • 20 hours agopublished 2.13.11 20 hours ago

phred

convert phred quality scores to and from other numerical representations

• phred
• quality score
• bioinformatics
• biology
• sequencing
• genomics

ekg

published 1.0.1 • 8 years agopublished 1.0.1 8 years ago

@gmod/vcf

High performance streaming Variant Call Format (VCF) parser in pure JavaScript

• vcf
• genomics
• bionode
• biojs

cmdcolin

published 5.0.10 • a month agopublished 5.0.10 a month ago

generic-filehandle

uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data

• bionode
• biojs
• ucsc
• genomics

cmdcolin

published 3.0.1 • a month agopublished 3.0.1 a month ago

idiogrammatik.js

An extensible, embeddable karyogram for the browser.

• karyogram
• genomics
• genome
• chromosomes
• idiogrammatik
• idiogram

ihodes

published 1.1.2 • 8 years agopublished 1.1.2 8 years ago

@gmod/indexedfasta

read indexed fasta and bgzipped fasta formats

• fasta
• genomics
• biojs
• bionode

cmdcolin

published 2.0.4 • 6 months agopublished 2.0.4 6 months ago

myseq-vcf

Query local or remote Tabix-indexed VCFs by genomic position

• myseq
• genomics
• VCF

mlinderm0

published 2.0.0 • 3 years agopublished 2.0.0 3 years ago

@gmod/bbi

Parser for BigWig/BigBed files

• bionode
• biojs
• bigwig
• bigbed
• ucsc
• genomics

cmdcolin

published 3.0.0 • 16 days agopublished 3.0.0 16 days ago

bionode-seq

Module for DNA, RNA and protein sequences manipulation

• bioinformatics
• genomics
• genetics
• dna
• util
• server
• client
• browser

bmpvieira

published 0.1.1 • 8 years agopublished 0.1.1 8 years ago

@gmod/bed

A BED file format parser with autoSql support

• bed
• autosql
• genomics
• bionode
• biojs

cmdcolin

published 2.1.2 • 6 months agopublished 2.1.2 6 months ago

canvasxpress-cli

Node program to run canvasXpress in the command line

• bioinformatics
• genomics
• data
• visualization
• graph
• reproducible
• research
• analytics

neuhausi

published 41.7.21 • 3 days agopublished 41.7.21 3 days ago

pileup

JavaScript track viewer

• genome
• track
• bam
• gene
• bioinformatics
• genomics
• sequencing
• reads
• interactive

akmorrow13

published 0.7.0 • 2 years agopublished 0.7.0 2 years ago

@jbrowse/core

JBrowse 2 core libraries used by plugins

• jbrowse
• jbrowse2
• bionode
• biojs
• genomics

cmdcolin

published 2.3.3 • 15 days agopublished 2.3.3 15 days ago

igv_feifei

Embeddable genomic visualization component based on the Integrative Genomics Viewer

• IGV
• genomics
• visualization

feifei9606

published 2.12.6-dev3.4 • 2 months agopublished 2.12.6-dev3.4 2 months ago

@gmod/tabix

Read Tabix-indexed files, supports both .tbi and .csi indexes

• bionode
• biojs
• genomics

cmdcolin

published 1.5.5 • a month agopublished 1.5.5 a month ago

@gmod/bam

Parser for BAM and BAM index (bai) files

• bionode
• biojs
• bam
• genomics

cmdcolin

published 1.1.18 • a month agopublished 1.1.18 a month ago