218 packages found

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Graph theory (a.k.a. network) library for analysis and visualisation

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published 3.5.018 days ago
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read from a compressed bgzip file (with .gzi) as if it were uncompressed

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published 1.2.419 days ago
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Read .2bit files in node or webpack

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published 1.1.32 months ago
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read and write GFF3 data as streams

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published 1.1.24 months ago
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read CRAM files with pure Javascript

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published 1.5.12 months ago
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High performance streaming VCF parser in pure JavaScript

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published 2.0.3a month ago
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Parser for BAM and BAM index (bai) files

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published 1.0.143 months ago
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read indexed fasta and bgzipped fasta formats

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published 1.0.114 months ago
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Read Tabix-indexed files, supports both .tbi and .csi indexes

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published 1.1.519 days ago
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Description

Color schemes for residues

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published 1.0.103 years ago
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Parses biom files

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published 1.0.92 years ago
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Read htsjdk Tribble indexes using pure JavaScript

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published 2.0.34 months ago
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A BED file format parser with autoSql support

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published 1.0.0a month ago
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Parser for BigWig/BigBed files

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published 1.0.69 days ago
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Description

range utility functions

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published 2.5.39 days ago
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Parses newick strings into JSON and JSON into newick

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published 1.5.04 years ago
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sequence utility functions

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published 3.3.339 days ago
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Parses 2D matrices (e.g. PAM)

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published 1.0.34 years ago
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Description

Parses strings from files in the GenomeDiff format generated by the breseq variant caller for haploid microbial organisms.

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published 1.7.13 years ago
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Description

Displays the information available in the Open PHACTS Linked Data cache about a compound.

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published 1.1.04 years ago