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cytoscape

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

maxkfranz

published 3.29.1 • 20 minutes agopublished 3.29.1 20 minutes ago

cyto-release-auto

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

akmo_3

published 3.72.0 • 8 months agopublished 3.72.0 8 months ago

cytoscape-auto-release-test

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

maxkfranz

published 3.50.0 • 8 months agopublished 3.50.0 8 months ago

cytoscape-select

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

alex_w_00

published 3.26.9 • 10 months agopublished 3.26.9 10 months ago

@gmod/ucsc-hub

Read and write UCSC track and assembly hub files in node or the browser

• trackDb
• genomics
• bionode
• biojs

cmdcolin

published 0.3.0 • 5 months agopublished 0.3.0 5 months ago

@l4legenda/cytoscape

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

l4legenda

published 3.25.0-unstable • a year agopublished 3.25.0-unstable a year ago

@qwoach/cytoscape

Graph theory (a.k.a. network) library for analysis and visualisation

• graph
• graph-theory
• network
• node
• edge
• vertex
• link
• analysis
• visualisation
• visualization
• draw
• render
• biojs
• cytoscape

arthabus

published 3.20.6 • 9 months agopublished 3.20.6 9 months ago

pdbe-molstar

Molstar implementation for PDBe

• Molstar
• 3D viewer
• PDBe
• biojs

pdbegroup

published 3.2.0 • 6 hours agopublished 3.2.0 6 hours ago

nextprot

neXtProt api javascript client

• uniprot
• nextprot
• rest
• api
• biojs

nextprot

published 0.0.178 • 8 months agopublished 0.0.178 8 months ago

@glysade/bio-parsers

A library of parsers for interconverting between genbank, fasta, and (eventually) sbol through Teselagen's intermediary json format

• genbank
• fasta
• parser
• dna
• rna
• protein
• sbol
• json
• jbei
• biojs
• teselagen

glysade

published 4.1.8 • a month agopublished 4.1.8 a month ago

@jlab-contrib/msa

Display multiple sequences

• bio
• biological
• biojs
• galaxy-vis
• msa
• multiple
• sequence
• alignment
• fasta
• clustal

zacharyrs

published 1.1.2 • 2 years agopublished 1.1.2 2 years ago

ve-sequence-utils

sequence utility functions

• sequence
• dna
• enzyme
• digest
• aminoacid
• utils
• teselagen
• biojs

tnrich

published 5.2.16 • a year agopublished 5.2.16 a year ago

msa-colorschemes

Color schemes for residues

• biojs
• color
• schemes

greenify

published 1.0.10 • 8 years agopublished 1.0.10 8 years ago

generic-filehandle

uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data

• bionode
• biojs
• ucsc
• genomics

cmdcolin

published 3.1.2 • 2 months agopublished 3.1.2 2 months ago

@gmod/bed

A BED file format parser with autoSql support

• bed
• autosql
• genomics
• bionode
• biojs

cmdcolin

published 2.1.3 • a month agopublished 2.1.3 a month ago

sgd_visualization5

[](https://travis-ci.org/yeastgenome/sgd_visualization)

• biojs
• react
• d3
• genetic
• biology
• variation

sweng66

published 2.0.2 • 10 months agopublished 2.0.2 10 months ago

@jbrowse/core

JBrowse 2 core libraries used by plugins

• jbrowse
• jbrowse2
• bionode
• biojs
• genomics

cmdcolin

published 2.11.0 • 8 days agopublished 2.11.0 8 days ago

grnsight

Web app and service for visualizing models of gene regulatory networks

• biojs
• GRN
• gene regulatory networks
• network
• visualization
• network visualization
• force graph visualization

dondi

published 6.0.7 • 7 months agopublished 6.0.7 7 months ago

biojs-io-matrix

Parses 2D matrices (e.g. PAM)

• biojs
• PAM
• matrix

greenify

published 1.0.3 • 9 years agopublished 1.0.3 9 years ago

msa

Display multiple sequences

• bio
• biological
• biojs
• galaxy-vis
• msa
• multiple
• sequence
• alignment
• fasta
• clustal

greenify

published 1.0.3 • 8 years agopublished 1.0.3 8 years ago