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Graph theory (a.k.a. network) library for analysis and visualisation
- graph
- graph-theory
- network
- node
- edge
- vertex
- link
- analysis
- visualisation
- visualization
- draw
- render
- biojs
- cytoscape
read and write GFF3 data as streams
read from a compressed bgzip file (with .gzi) as if it were uncompressed
uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data
Parser for BAM and BAM index (bai) files
Renders snippets on demand
JBrowse 2 core libraries used by plugins
Read Tabix-indexed files, supports both .tbi and .csi indexes
A BED file format parser with autoSql support
Parser for BigWig/BigBed files
High performance streaming Variant Call Format (VCF) parser in pure JavaScript
read CRAM files with pure Javascript
read indexed fasta and bgzipped fasta formats
JBrowse 2 code shared between sv type code
Parses newick strings into JSON and JSON into newick
Read .2bit files in node or webpack
uniform interface for accessing binary data from local files, remote HTTP resources, and browser Blob data
utilities to read GFF3 data
Read features from JBrowse 1 format nested containment list JSON
JBrowse 2 code shared between products but not used by plugins