shinout

35 Packages by shinout

  • argparser object to parse commandline-args and options.
  • arrayemitter EventEmitter emittin array-iteration events.
  • arraystream ReadableStream of arrays and hash variables.
  • bamreader object to read bams
  • browser browsing urls with cookies, that is, we can scrape with authenticated pages!
  • clipcrop a tool for detecting structural variations using soft-clipping information
  • consolog console log without [%] function
  • copy-class copy class (coffee-script class, JS's constructor)
  • dna utility functions to handle DNA/RNA string data
  • fastareader FASTA DNA/RNA sequence reader
  • fqreader reads FASTQ files
  • gitax from NCBI gi to taxonomy id
  • interval-tree interval tree in javascript
  • jsrel JavaScript lightweight synchronous RDB
  • junjo Yet Another Flow Control (YAFC)
  • linestream a readable stream emitting lines (from files, streams)
  • master-worker multi process node execution with a single file
  • modifier JavaScript validator / modifier
  • multiwriter multi-writing
  • pairgen paired-end NGS simulator.
  • priprop a tiny library for private properties
  • random-tools utility random functions
  • samreader parsing SAM format
  • shinout.struct a helper to create getter/setter properties with validations, type checking, defaults, private, required, immutable, and so on...
  • sortedlist sorted list
  • sqd executing unix commands with multi processes
  • standalone Creates an isolated thread / process in JavaScript (Node.js and modern browsers)
  • statichoster host static files
  • svgen generate DNA sequence with SNV and Structural Variations from FASTA format
  • termcolor console.color
  • txreader read transcriptome data
  • u2r url to request info
  • umecob JS template engine available in both Browsers and Node.js supporting asynchronous methods with JSDeferred.
  • xml2jade2 xml to jade
  • zlib-raw-sync synchronous zlib in Node>=0.8