msa-annots

Parser for annotation files from Jalview

Official spec

Getting Started

Install the module with: npm install msa-annots

var annots= require('msa-annots');
annots.read(<url to annot file>); // return JSON representation

Documentation

.parse(name)

Parameter: file Type: String Example: (see test/dummy.annot)

Example result.

.read(url)

Parameter: url Type: String Example: https://raw.githubusercontent.com/greenify/msa-annots/master/test/dummy.annot

Contributing

Please submit all issues and pull requests to the greenify/msa-annots repository!

Support

If you have any problem or suggestion please open an issue here.

License

This software is licensed under the Apache 2 license, quoted below.

Copyright (c) 2014, greenify

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.