A Node.js wrapper for SRA Toolkit.
Install bionode-sra with npm:
$ npm install bionode-sra
To use it as a command line tool, you can install it globally by adding
If you're using bionode-sra with Node.js, you can require the module:
var sra =var fastqDump =
Please read the documentation for the methods exposed by bionode.
$ bionode-sra fastq-dump SRR1509835.sra$ bionode-sra fastq-dump SRR1509835.sra fastqOutputDirectory
To contribute, clone this repo locally and commit your code on a separate branch.
Please write unit tests for your code, and check that everything works by running the following before opening a pull-request:
$ npm test
Please also check for code coverage:
$ npm run coverage
To rebuild the documentation using the comments in the code:
$ npm run build-docs
Check the issues for ways to contribute.