higlass-labelled-point-track

GeoJSON Track for HiGlass

Display your favorite GeoJSON annotation right in HiGlass.

Note: This is the source code for the GeoJSON track only! You might want to check out the following repositories as well:

• HiGlass viewer: https://github.com/hms-dbmi/higlass
• HiGlass server: https://github.com/hms-dbmi/higlass-server
• HiGlass docker: https://github.com/hms-dbmi/higlass-docker

Installation

npm install higlass-geojson

Usage

To try this track out, head over to https://github.com/pkerpedjiev/million-primes and start a server using the provided notebook.

1. Make sure you load this track prior to hglib.js. For example:

<script src="higlass-labelled-points-track.js"></script>
<script src="hglib.js"></script>
<script>
  ...
</script>

1. Now, configure the track in your view config and be happy!

{
  ...
  {
    server: 'http://localhost:8001/api/v1',
    tilesetUid: 'my-outrageously-fancy-geojson-db',
    uid: 'my-outrageously-fancy-geojson-db',
    type: 'labelled-points-track',
    options: {
    },
  },
  ...
}

Take a look at src/index.html for an example.

Development

Installation

$ git clone https://github.com/pkerpedjiev/labelled-points-track && higlass-labelled-points-track
$ npm install

Commands

Developmental server: npm start Production build: npm run build