@aics/web-3d-viewer

AICS Image Viewer

For the latest stable release, please visit https://allen-cell-animated.github.io/website-3d-cell-viewer-release/

This is a browser based volume viewer built with React and WebGL (Three.js). Volume data is provided to the core 3d viewer via one of the following file formats:

• a url to a OME-ZARR image
• a url to a OME-TIFF file
• a json file containing dimensions and other metadata, and texture atlases (png files containing volume slices tiled across the 2d image). These texture atlases must be prepared in advance before loading into this viewer.

The volume shader itself is a heavily modified version of one that has distant origins in Bisque.

to use

• https://allen-cell-animated.github.io/website-3d-cell-viewer-release/?url=path/to/ZARR
• for more url parameters, see public/index.tsx

or as React component:

• npm install @aics/web-3d-viewer
• import the app as import { ImageViewerApp } from "@aics/web-3d-viewer"
• send in props as is shown in public/index.jsx

    <ImageViewerApp
        baseUrl="http://dev-aics-dtp-001.corp.alleninstitute.org/cellviewer-1-4-0/Cell-Viewer_Thumbnails/"
        cellPath="AICS-17/AICS-17_4187_23618_atlas.json"
        ... (also see src/aics-image-viewer/components/App/types.ts for full props specification) ...
    />