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A WebGL-powered JavaScript library for interactive tree visualisation.
React component (and hook) for phylogenetic tree visualistion based on @mkoliba/phylogeny-tree
Phylogenetic tree visualistion for the web
TnT tree display
Phylogenetic tree visualisation for the web.
Community finding algorithm.
- louvain
- algorithm
- community
- finding
- ist
- tecnico
- luis
- rita
- warcraft12321
- phylogenetic
- networks
- application
- biomedical
- engineering
Tree data manipulation for TnT
TypeScript/JavaScript methods for parsing and writing in Newick tree format.
A packaged version of Christain M. Zmasek's archaeopteryx.js phylogenetic tree viewer
Infomap optimizes the map equation, which exploits the information-theoretic duality between the problem of compressing data, and the problem of detecting and extracting significant patterns or structures within those data.
Phylotree with react
TnT library for displaying trees and track-based annotations
Generates a benchmark network upon input of a mix and average degree for each node in the graph.
- girvan
- newman
- benchmark
- algorithm
- synthetic
- network
- ist
- tecnico
- luis
- rita
- warcraft12321
- community
- finding
- phylogenetic
Layered Label Propagation is a semi-supervised machine learning algorithm that assigns labels to previously unlabeled data points. At the start of the algorithm, a (generally small) subset of the data points have labels (or classifications). These labels
- layered
- label
- propagation
- ist
- tecnico
- luis
- rita
- warcraft12321
- community
- finding
- phylogenetic
- networks
- application
This algorithm assesses how similar are 2 input partitions of a given network.
- normalized
- mutual
- information
- ist
- tecnico
- luis
- rita
- warcraft12321
- community
- finding
- phylogenetic
- networks
- application
Console line interface that process phylogenetic trees metrics.
- phylogenetic trees
- metrics
- robinson foulds
- cli
- phylo
- newick
- phylogeny
- phylogenetic
- triplet metric
- quartet metric
- compararison metrics
JS library for visualising and comparing phylogenetic trees
Software to graphically display the results of a CAFE analysis
React integration of phylocanvas.gl. Component and hook for phylogenetic tree visualistion.
Given 2 arrays, hamming distance is calculated between them.
- hamming
- distance
- ist
- tecnico
- luis
- rita
- warcraft12321
- community
- finding
- phylogenetic
- networks
- application
- biomedical
- engineering