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bionode-fastq

Streamable FASTQ parser

• bio
• biology
• bioinformatics
• bionode
• fastq
• parser
• streams
• cli
• science

bmpvieira

published 2.2.0 • 7 years agopublished 2.2.0 7 years ago

biotech-js

Package developed at A&A Biotechnology for reading all kinds of biotechnology related files

• biotechnology
• biotech
• genbank
• fasta
• fastq
• gbk
• gp
• proteinase
• sequence

tomek7667

published 1.0.10 • 2 months agopublished 1.0.10 2 months ago

bioinformatics-parser

.fasta and .fastq parsers

• bioinformatics
• fasta
• fastq

romgrk

published 1.1.2 • 3 years agopublished 1.1.2 3 years ago

fasta-tools

Tools for working with FASTA/FASTQ files (Bioinformatics).

• fasta
• fastq
• bioinformatics

jmjuanes

published 0.2.1 • 7 years agopublished 0.2.1 7 years ago

@tomek7667/tmk-biotech

Used for reading fasta and fastq files and structuring as valid javascript objects. The package provides also some useful utility functions like complementarify used for getting complementary sequence, or sanitizeGenome for sanitizing user input.

• aabiot
• biotechnology
• fasta
• fastq
• fastq.gz
• read fasta
• read fastq
• read fastq.gz
• read fast archive
• complementary
• javascript genome

tomek7667

published 1.0.8 • 2 years agopublished 1.0.8 2 years ago

streaming-sequence-extractor

[![NPM][npm-img]][npm-url] [![Build Status][ci-img]][ci-url]

• GenBank
• FASTA
• FASTQ
• SBOL
• DNA
• RNA
• AA
• amino acid
• sequence
• stream
• extract

juul

published 0.0.4 • 7 years agopublished 0.0.4 7 years ago

fqreader

reads FASTQ files

• FASTQ
• bioinformatics

shinout

published 0.0.2 • 10 years agopublished 0.0.2 10 years ago

fastqparser

A simple fastq stream parser

• fastq
• bioinformatics

matthewralston

published 1.0.0 • 5 years agopublished 1.0.0 5 years ago

disk-fastq

fastq wrapper persisted queue on disk to save some memory

• queue
• disk
• fastq
• promise

fengkx

published 0.1.9 • 2 years agopublished 0.1.9 2 years ago

samfilter

These two tools allow the counting of alignment flags (https://broadinstitute.github.io/picard/explain-flags.html) in a SAM formated file and the extraction of reads for selected flags.

• SAM
• filter
• alignment
• flag
• fastq
• extract
• reads

jallmer

published 0.2.0 • 3 years agopublished 0.2.0 3 years ago