npm

bioinformatics-parser

.fasta and .fastq parsers

• bioinformatics
• fasta
• fastq

romgrk

published 1.1.2 • a year agopublished 1.1.2 a year ago

bionode-fastq

Streamable FASTQ parser

• bio
• biology
• bioinformatics
• bionode
• fastq
• parser
• streams
• cli
• science

bmpvieira

published 2.2.0 • 5 years agopublished 2.2.0 5 years ago

streaming-sequence-extractor

[![NPM][npm-img]][npm-url] [![Build Status][ci-img]][ci-url]

• GenBank
• FASTA
• FASTQ
• SBOL
• DNA
• RNA
• AA
• amino acid
• sequence
• stream
• extract

juul

published 0.0.4 • 5 years agopublished 0.0.4 5 years ago

fasta-tools

Tools for working with FASTA/FASTQ files (Bioinformatics).

• fasta
• fastq
• bioinformatics

jmjuanes

published 0.2.1 • 5 years agopublished 0.2.1 5 years ago

disk-fastq

fastq wrapper persisted queue on disk to save some memory

• queue
• disk
• fastq
• promise

fengkx

published 0.1.9 • 7 months agopublished 0.1.9 7 months ago

fastqparser

A simple fastq stream parser

• fastq
• bioinformatics

matthewralston

published 1.0.0 • 3 years agopublished 1.0.0 3 years ago

fqreader

reads FASTQ files

• FASTQ
• bioinformatics

shinout

published 0.0.2 • 8 years agopublished 0.0.2 8 years ago

samfilter

These two tools allow the counting of alignment flags (https://broadinstitute.github.io/picard/explain-flags.html) in a SAM formated file and the extraction of reads for selected flags.

• SAM
• filter
• alignment
• flag
• fastq
• extract
• reads

jallmer

published 0.2.0 • a year agopublished 0.2.0 a year ago