goeBURST

This package performs the goeBURST algorithm on a set of profiles.

INPUT

The package uses as input a graph object defined in PHYLOViZ Online as the following:

var profile_array = [
	[1,3], //Profile of ST1
	[1,2] //Profile of ST2
];

var identifiers = {
	0: "ST1",
	1: "ST2"
}

var algorithm = 'prim'; //or kruskal

Usage example

var goeBURST = require('goeburst');

goeBURST(profile_array, indetifiers, algorithm, function(links, distanceMatrix){
	console.log(links, distanceMatrix); //Results from goeBURST
});