bioshiny

    0.2.1 • Public • Published

    bioshiny

    Life cycle: experimental Build Status Downloads Version License

    bioshiny is a project to develop the R Shiny applications for bioinformatics research.

    bioshiny

    • One-click to create bioshiny Shiny application and plugins
    • Create and share more plugins.
    • Using npm and GitHub to share the Shiny applications and plugins (CRAN team limited file size)

    o

    Installation

    git clone https::/github.com/openbiox/bioshiny
    cd bioshiny
    yarn global bioshiny
    bioshiny_deps_r

    Usage

    echo 'export BIOSHINY_CONFIG="~/.bioshiny/shiny.config.yaml" >> ~/.bashrc'
    . ~/.bashrc
    Rscript -e "bioshiny::set_shiny_workers(1)"
    bioshiny_start
     
    # vcfanno and annovar plugin need to set the tools path 

    How to contribute?

    Please fork the GitHub bioshiny repository, modify it, and submit a pull request to us.

    Maintainer

    Jianfeng Li

    License

    MIT

    Install

    npm i bioshiny

    DownloadsWeekly Downloads

    11

    Version

    0.2.1

    License

    MIT

    Unpacked Size

    3.25 MB

    Total Files

    650

    Last publish

    Collaborators

    • lee_jianfeng