biojs-vis-blasterjs
Authors
- Aitor Blanco Míguez (aiblanco@uvigo.es)
- Dr. Florentino Fernández Riverola (riverola@uvigo.es)
- Dr. Anália Maria Garcia Lourenço (analia@uvigo.es)
- Dr. Borja Sánchez García (borja.sanchez@csic.es)
Description
A free to use, open source Javascript BLAST alignments viewer library created by SING group.
How to cite
Blanco-Míguez A, Fdez-Riverola F, SánchezB, Lourenço A (2018) BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results. PLoS ONE 13(10): e0205286. https://doi.org/10.1371/journal.pone.0205286
Requeriments
- Bootstrap 3 (http://getbootstrap.com/)
- HTML2CANVAS ([http://html2canvas.hertzen.com/])
Accepted files
BLAST text and XML output files (-outfmt 0 and 5)
You can check NCBI BLAST user manual.
Getting Started
Install the module with: npm install biojs-vis-blasterjs
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Custom options:
Get alignments via String instead of input form:
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Define a custom callback on alignment table item click event:
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Institution
[© SING - Sistemas Informáticos de Nueva Generación 2015]
Department of Computer Science, University of Vigo
ESEI - Escuela Superior de Ingeniería Informática Edificio politécnico
Campus Universitario As Lagoas s/n
32004 Ourense, Spain
Tel: +34 988 387 013
Fax: +34 988 387 001
Contributing
All contributions are welcome.
Support
If you have any problem or suggestion please open an issue here.
License
BlasterJS is a free to use, open source JS library created by SING Group. Copyright (C) 2019 SING - Sistemas Informaticos de Nueva Generacion
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.